Fishgrs Install Page

choco install fish

git clone https://github.com/example/fishgrs.git
cd fishgrs

If Conda conflicts persist (e.g., due to corporate firewalls or legacy R versions), Docker is your best friend. Docker containers package FishGRS with everything it needs.

Once installed, you can start Fish simply by typing fish in your current terminal. However, to truly embrace the new environment, you will likely want to set it as your default login shell.

To do this, you first need to know where Fish is installed. Run the command which fish (usually resulting in /usr/bin/fish or /opt/homebrew/bin/fish). Then, use the chsh (change shell) command: fishgrs install

chsh -s /usr/bin/fish

After logging out and back in, your terminal will launch directly into the Friendly Interactive Shell.

conda install -c bioconda plink
which plink  # Should return the path

docker run --rm -it fishgrs/fishgrs:latest fishgrs --help

With Docker, the fishgrs install process is essentially instantaneous because you are downloading a pre-built image. choco install fish

Assuming the FishGRS package is available on Bioconda or PyPI, here are the typical variations:

Option A (Bioconda – most common):

conda install -c bioconda fishgrs

Option B (PyPI – if the developer hosts on PyPI):

pip install fishgrs

Option C (Development version from GitHub): git clone https://github

git clone https://github.com/username/fishgrs.git
cd fishgrs
pip install -e .

After running one of these methods, Conda/Pip will resolve dependencies and download PLINK, R, and all required Python libraries automatically. This is the true "fishgrs install" experience.